View source for Using batch system at BINP/GCF

== Batch system usage simplified ==

The BINP/GCF batch system is Sun Grid Engine.

To submit a job, do:

# After login set up your working environment (setupSCTAU, asetup, source build/x86..)
# Change to the job working directory
# Submit the job using

 qsub -cwd -V -b y -shell n progam_name program_parameters

For instance,

 qsub -cwd -V -b y -shell n ctaurun.py test_calor_clusters.py

Where 
* <tt>qsub</tt> - submit a job
* <tt>-cwd</tt> - work in the current directory, also put job' stdout and stderr there (the files will be program_name.oNUMBER and program_name.eNUBMER)
* <tt>-V</tt> - transmit environment variables (they were set up at the step 1) into the job
* <tt>-b y -shell n</tt> - run program_name as an executable file, do not spawn an extra shell

To check job status, issue
 qstat

For details please refer to <tt>man qsub</tt>, <tt>man qstat</tt>.

[[Category:Software]]